Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clptm1Q8VBZ3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Clptm1Q8VBZ3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clptm1Q8VBZ3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clptm1Q8VBZ3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clptm1Q8VBZ3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clptm1Q8VBZ3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.77■□□□□ 0.75
Clptm1Q8VBZ3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clptm1Q8VBZ3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clptm1Q8VBZ3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clptm1Q8VBZ3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clptm1Q8VBZ3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clptm1Q8VBZ3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clptm1Q8VBZ3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clptm1Q8VBZ3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Clptm1Q8VBZ3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clptm1Q8VBZ3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clptm1Q8VBZ3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Clptm1Q8VBZ3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.72■□□□□ 0.75
Clptm1Q8VBZ3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Clptm1Q8VBZ3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Gm26571-201ENSMUST00000181399 666 ntBASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clptm1Q8VBZ3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clptm1Q8VBZ3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms