Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdt1Q8R4E9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Cdt1Q8R4E9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdt1Q8R4E9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Gm10849-201ENSMUST00000100397 618 ntBASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdt1Q8R4E9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdt1Q8R4E9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdt1Q8R4E9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Mir6236-201ENSMUST00000184437 123 ntBASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.78■□□□□ 0.6
Cdt1Q8R4E9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdt1Q8R4E9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Cdt1Q8R4E9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cdt1Q8R4E9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdt1Q8R4E9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdt1Q8R4E9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdt1Q8R4E9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms