Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc59Q8R2N0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc59Q8R2N0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc59Q8R2N0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ccdc59Q8R2N0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.53
Ccdc59Q8R2N0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc59Q8R2N0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc59Q8R2N0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc59Q8R2N0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc59Q8R2N0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc59Q8R2N0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ccdc59Q8R2N0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccdc59Q8R2N0 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Gm15039-201ENSMUST00000118914 875 ntBASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Gm13241-201ENSMUST00000094493 780 ntBASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc59Q8R2N0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc59Q8R2N0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc59Q8R2N0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms