Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Cap2-205ENSMUST00000225824 1634 ntBASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nudcd3Q8R1N4 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nudcd3Q8R1N4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nudcd3Q8R1N4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nudcd3Q8R1N4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nudcd3Q8R1N4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nudcd3Q8R1N4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd3Q8R1N4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd3Q8R1N4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd3Q8R1N4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Nudcd3Q8R1N4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Gm40881-201ENSMUST00000223397 166 ntBASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.38■□□□□ 0.69
Nudcd3Q8R1N4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Gm43530-201ENSMUST00000195920 274 ntBASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nudcd3Q8R1N4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd3Q8R1N4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd3Q8R1N4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd3Q8R1N4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.33■□□□□ 0.69
Nudcd3Q8R1N4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nudcd3Q8R1N4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Nudcd3Q8R1N4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nudcd3Q8R1N4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms