Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.94■□□□□ 0.94
Rpp40Q8R1F9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpp40Q8R1F9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp40Q8R1F9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rpp40Q8R1F9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp40Q8R1F9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp40Q8R1F9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp40Q8R1F9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp40Q8R1F9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp40Q8R1F9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rpp40Q8R1F9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rpp40Q8R1F9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rpp40Q8R1F9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rpp40Q8R1F9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rpp40Q8R1F9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.89■□□□□ 0.93
Rpp40Q8R1F9 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.89■□□□□ 0.93
Rpp40Q8R1F9 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.89■□□□□ 0.93
Rpp40Q8R1F9 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.89■□□□□ 0.93
Rpp40Q8R1F9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rpp40Q8R1F9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp40Q8R1F9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp40Q8R1F9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rpp40Q8R1F9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp40Q8R1F9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp40Q8R1F9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp40Q8R1F9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp40Q8R1F9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Gm9988-201ENSMUST00000069786 435 ntBASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rpp40Q8R1F9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms