Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 AA386476-201ENSMUST00000098781 1665 ntBASIC18.35■□□□□ 0.53
Clrn1Q8K445 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Clrn1Q8K445 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Gm8493-201ENSMUST00000196881 489 ntBASIC18.34■□□□□ 0.53
Clrn1Q8K445 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.34■□□□□ 0.53
Clrn1Q8K445 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clrn1Q8K445 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn1Q8K445 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn1Q8K445 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.33■□□□□ 0.53
Clrn1Q8K445 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn1Q8K445 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clrn1Q8K445 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clrn1Q8K445 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.32■□□□□ 0.52
Clrn1Q8K445 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.32■□□□□ 0.52
Clrn1Q8K445 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Clrn1Q8K445 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.32■□□□□ 0.52
Clrn1Q8K445 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clrn1Q8K445 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Notumos-201ENSMUST00000151998 2659 ntBASIC18.31■□□□□ 0.52
Clrn1Q8K445 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clrn1Q8K445 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Clrn1Q8K445 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clrn1Q8K445 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clrn1Q8K445 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms