Protein–RNA interactions for Protein: Q8K441

Abca6, ATP-binding cassette sub-family A member 6, mousemouse

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca6Q8K441 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca6Q8K441 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC28.31■■■□□ 2.12
Abca6Q8K441 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca6Q8K441 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca6Q8K441 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Abca6Q8K441 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca6Q8K441 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca6Q8K441 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca6Q8K441 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca6Q8K441 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca6Q8K441 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC28.29■■■□□ 2.12
Abca6Q8K441 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Abca6Q8K441 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Abca6Q8K441 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca6Q8K441 Gm6576-201ENSMUST00000169678 883 ntBASIC28.29■■■□□ 2.12
Abca6Q8K441 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca6Q8K441 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca6Q8K441 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca6Q8K441 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
Abca6Q8K441 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca6Q8K441 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca6Q8K441 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca6Q8K441 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC28.26■■■□□ 2.12
Abca6Q8K441 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
Abca6Q8K441 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca6Q8K441 Gm5643-201ENSMUST00000117081 966 ntBASIC28.26■■■□□ 2.11
Abca6Q8K441 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca6Q8K441 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Abca6Q8K441 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Abca6Q8K441 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Abca6Q8K441 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca6Q8K441 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Abca6Q8K441 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC28.25■■■□□ 2.11
Abca6Q8K441 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Abca6Q8K441 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Abca6Q8K441 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Abca6Q8K441 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca6Q8K441 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca6Q8K441 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca6Q8K441 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC28.23■■■□□ 2.11
Abca6Q8K441 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Abca6Q8K441 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Abca6Q8K441 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Abca6Q8K441 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC28.22■■■□□ 2.11
Abca6Q8K441 Gm15565-201ENSMUST00000118890 427 ntBASIC28.22■■■□□ 2.11
Abca6Q8K441 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Abca6Q8K441 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca6Q8K441 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca6Q8K441 Gm37563-201ENSMUST00000192580 1513 ntBASIC28.22■■■□□ 2.11
Abca6Q8K441 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca6Q8K441 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Abca6Q8K441 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Abca6Q8K441 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC28.21■■■□□ 2.11
Abca6Q8K441 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC28.21■■■□□ 2.11
Abca6Q8K441 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Abca6Q8K441 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Abca6Q8K441 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC28.21■■■□□ 2.11
Abca6Q8K441 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Abca6Q8K441 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Abca6Q8K441 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Abca6Q8K441 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Abca6Q8K441 Gm11643-201ENSMUST00000119578 864 ntBASIC28.2■■■□□ 2.1
Abca6Q8K441 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC28.2■■■□□ 2.1
Abca6Q8K441 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Abca6Q8K441 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
Abca6Q8K441 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Abca6Q8K441 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Abca6Q8K441 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Abca6Q8K441 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Abca6Q8K441 Arhgef33-211ENSMUST00000225658 473 ntBASIC28.19■■■□□ 2.1
Abca6Q8K441 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca6Q8K441 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Abca6Q8K441 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC28.19■■■□□ 2.1
Abca6Q8K441 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca6Q8K441 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Abca6Q8K441 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Abca6Q8K441 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Abca6Q8K441 Gm12896-201ENSMUST00000118430 226 ntBASIC28.18■■■□□ 2.1
Abca6Q8K441 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca6Q8K441 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Abca6Q8K441 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC28.17■■■□□ 2.1
Abca6Q8K441 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Abca6Q8K441 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC28.17■■■□□ 2.1
Abca6Q8K441 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC28.16■■■□□ 2.1
Abca6Q8K441 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Abca6Q8K441 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca6Q8K441 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca6Q8K441 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Abca6Q8K441 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC28.15■■■□□ 2.1
Abca6Q8K441 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC28.14■■■□□ 2.1
Abca6Q8K441 Gm37055-201ENSMUST00000191866 133 ntBASIC28.14■■■□□ 2.1
Abca6Q8K441 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca6Q8K441 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Abca6Q8K441 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms