Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cchcr1Q8K2I2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Cchcr1Q8K2I2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cchcr1Q8K2I2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 Gm10209-201ENSMUST00000203397 1607 ntBASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cchcr1Q8K2I2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
Cchcr1Q8K2I2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cchcr1Q8K2I2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cchcr1Q8K2I2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cchcr1Q8K2I2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.93■■□□□ 1.26
Cchcr1Q8K2I2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cchcr1Q8K2I2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cchcr1Q8K2I2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cchcr1Q8K2I2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cchcr1Q8K2I2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cchcr1Q8K2I2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cchcr1Q8K2I2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cchcr1Q8K2I2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.26
Cchcr1Q8K2I2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cchcr1Q8K2I2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cchcr1Q8K2I2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cchcr1Q8K2I2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Gm9847-201ENSMUST00000052528 599 ntBASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cchcr1Q8K2I2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cchcr1Q8K2I2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms