Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nckap1lQ8K1X4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nckap1lQ8K1X4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nckap1lQ8K1X4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nckap1lQ8K1X4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nckap1lQ8K1X4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1lQ8K1X4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.83■□□□□ 0.6
Nckap1lQ8K1X4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1lQ8K1X4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1lQ8K1X4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1lQ8K1X4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nckap1lQ8K1X4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nckap1lQ8K1X4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Nckap1lQ8K1X4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.8■□□□□ 0.6
Nckap1lQ8K1X4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nckap1lQ8K1X4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nckap1lQ8K1X4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms