Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Clip4Q8CI96 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clip4Q8CI96 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Clip4Q8CI96 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.51■□□□□ 0.71
Clip4Q8CI96 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clip4Q8CI96 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.49■□□□□ 0.71
Clip4Q8CI96 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clip4Q8CI96 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clip4Q8CI96 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Mir7075-201ENSMUST00000184187 82 ntBASIC19.47■□□□□ 0.71
Clip4Q8CI96 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Clip4Q8CI96 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip4Q8CI96 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Gm6139-201ENSMUST00000079261 882 ntBASIC19.45■□□□□ 0.7
Clip4Q8CI96 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip4Q8CI96 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip4Q8CI96 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clip4Q8CI96 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clip4Q8CI96 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip4Q8CI96 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip4Q8CI96 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip4Q8CI96 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip4Q8CI96 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip4Q8CI96 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.43■□□□□ 0.7
Clip4Q8CI96 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.42■□□□□ 0.7
Clip4Q8CI96 Golph3-205ENSMUST00000228671 2842 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms