Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh1Q8CGV4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh1Q8CGV4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rdh1Q8CGV4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Gm29257-201ENSMUST00000186115 639 ntBASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Gm37179-201ENSMUST00000194862 823 ntBASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rdh1Q8CGV4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Rdh1Q8CGV4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rdh1Q8CGV4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rdh1Q8CGV4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh1Q8CGV4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh1Q8CGV4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh1Q8CGV4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.9■□□□□ 0.62
Rdh1Q8CGV4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh1Q8CGV4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rdh1Q8CGV4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rdh1Q8CGV4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rdh1Q8CGV4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rdh1Q8CGV4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rdh1Q8CGV4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.89■□□□□ 0.61
Rdh1Q8CGV4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms