Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 Gm9959-201ENSMUST00000068277 390 ntBASIC17.36■□□□□ 0.37
ShfQ8CG80 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ShfQ8CG80 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ShfQ8CG80 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ShfQ8CG80 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ShfQ8CG80 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ShfQ8CG80 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShfQ8CG80 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ShfQ8CG80 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShfQ8CG80 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ShfQ8CG80 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ShfQ8CG80 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ShfQ8CG80 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ShfQ8CG80 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ShfQ8CG80 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ShfQ8CG80 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.34■□□□□ 0.37
ShfQ8CG80 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
ShfQ8CG80 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ShfQ8CG80 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ShfQ8CG80 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShfQ8CG80 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.33■□□□□ 0.37
ShfQ8CG80 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShfQ8CG80 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.33■□□□□ 0.37
ShfQ8CG80 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ShfQ8CG80 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShfQ8CG80 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ShfQ8CG80 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShfQ8CG80 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ShfQ8CG80 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.33■□□□□ 0.36
ShfQ8CG80 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShfQ8CG80 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShfQ8CG80 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ShfQ8CG80 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ShfQ8CG80 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ShfQ8CG80 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
ShfQ8CG80 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.32■□□□□ 0.36
ShfQ8CG80 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.32■□□□□ 0.36
ShfQ8CG80 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.32■□□□□ 0.36
ShfQ8CG80 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ShfQ8CG80 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ShfQ8CG80 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ShfQ8CG80 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.31■□□□□ 0.36
ShfQ8CG80 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ShfQ8CG80 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ShfQ8CG80 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ShfQ8CG80 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.3■□□□□ 0.36
ShfQ8CG80 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.3■□□□□ 0.36
ShfQ8CG80 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ShfQ8CG80 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ShfQ8CG80 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.29■□□□□ 0.36
ShfQ8CG80 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
ShfQ8CG80 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ShfQ8CG80 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.29■□□□□ 0.36
ShfQ8CG80 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
ShfQ8CG80 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms