Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb7Q8CDY9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Pcdhb7Q8CDY9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb7Q8CDY9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb7Q8CDY9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb7Q8CDY9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb7Q8CDY9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb7Q8CDY9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhb7Q8CDY9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb7Q8CDY9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb7Q8CDY9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhb7Q8CDY9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb7Q8CDY9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhb7Q8CDY9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdhb7Q8CDY9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Pcdhb7Q8CDY9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb7Q8CDY9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhb7Q8CDY9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhb7Q8CDY9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms