Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Prpf31Q8CCF0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Gm10033-202ENSMUST00000211874 928 ntBASIC21.3■■□□□ 1
Prpf31Q8CCF0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Prpf31Q8CCF0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Gm42569-201ENSMUST00000200539 472 ntBASIC21.29■■□□□ 1
Prpf31Q8CCF0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Prpf31Q8CCF0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
Prpf31Q8CCF0 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.28■■□□□ 1
Prpf31Q8CCF0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Gm10849-201ENSMUST00000100397 618 ntBASIC21.28■■□□□ 1
Prpf31Q8CCF0 Gm18671-201ENSMUST00000214826 683 ntBASIC21.28■■□□□ 1
Prpf31Q8CCF0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prpf31Q8CCF0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.27■■□□□ 1
Prpf31Q8CCF0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Prpf31Q8CCF0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Prpf31Q8CCF0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Prpf31Q8CCF0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prpf31Q8CCF0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prpf31Q8CCF0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 Reep4-203ENSMUST00000226563 1444 ntBASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 Gm7291-201ENSMUST00000199147 382 ntBASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prpf31Q8CCF0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Gm27405-201ENSMUST00000184201 112 ntBASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prpf31Q8CCF0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms