Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.45■□□□□ 0.38
Lysmd4Q8CC84 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Gm40881-201ENSMUST00000223397 166 ntBASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.44■□□□□ 0.38
Lysmd4Q8CC84 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd4Q8CC84 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 AA386476-201ENSMUST00000098781 1665 ntBASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd4Q8CC84 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Lysmd4Q8CC84 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Lysmd4Q8CC84 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Lysmd4Q8CC84 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Gm9870-201ENSMUST00000063874 645 ntBASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Lysmd4Q8CC84 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms