Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Gm22325-201ENSMUST00000158904 308 ntBASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a6Q8C6K9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a6Q8C6K9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Gm10812-201ENSMUST00000099864 546 ntBASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.61■□□□□ 0.41
Col6a6Q8C6K9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a6Q8C6K9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col6a6Q8C6K9 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.6■□□□□ 0.41
Col6a6Q8C6K9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col6a6Q8C6K9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a6Q8C6K9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a6Q8C6K9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col6a6Q8C6K9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a6Q8C6K9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a6Q8C6K9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a6Q8C6K9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.58■□□□□ 0.4
Col6a6Q8C6K9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a6Q8C6K9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col6a6Q8C6K9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a6Q8C6K9 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms