Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Fam78aQ8C552 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam78aQ8C552 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.75■□□□□ 0.91
Fam78aQ8C552 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Gm6420-201ENSMUST00000193885 723 ntBASIC20.75■□□□□ 0.91
Fam78aQ8C552 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam78aQ8C552 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Gm4968-201ENSMUST00000071458 858 ntBASIC20.74■□□□□ 0.91
Fam78aQ8C552 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam78aQ8C552 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Fam78aQ8C552 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam78aQ8C552 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Fam78aQ8C552 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam78aQ8C552 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.72■□□□□ 0.91
Fam78aQ8C552 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam78aQ8C552 Gm13148-201ENSMUST00000118892 745 ntBASIC20.72■□□□□ 0.91
Fam78aQ8C552 Gm13534-201ENSMUST00000121169 513 ntBASIC20.72■□□□□ 0.91
Fam78aQ8C552 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.72■□□□□ 0.91
Fam78aQ8C552 Gm6365-201ENSMUST00000054711 744 ntBASIC20.72■□□□□ 0.91
Fam78aQ8C552 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam78aQ8C552 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.72■□□□□ 0.91
Fam78aQ8C552 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Nespas-201ENSMUST00000143738 1083 ntBASIC20.71■□□□□ 0.91
Fam78aQ8C552 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Fam78aQ8C552 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Gm10653-202ENSMUST00000139570 835 ntBASIC20.7■□□□□ 0.9
Fam78aQ8C552 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.7■□□□□ 0.9
Fam78aQ8C552 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam78aQ8C552 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.7■□□□□ 0.9
Fam78aQ8C552 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Fam78aQ8C552 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Fam78aQ8C552 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fam78aQ8C552 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Fam78aQ8C552 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms