Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.9■■□□□ 1.26
Usp44Q8C2S0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
Usp44Q8C2S0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Usp44Q8C2S0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Usp44Q8C2S0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Usp44Q8C2S0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Gm40848-201ENSMUST00000221998 324 ntBASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Usp44Q8C2S0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp44Q8C2S0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Usp44Q8C2S0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Usp44Q8C2S0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Usp44Q8C2S0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Usp44Q8C2S0 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.88■■□□□ 1.25
Usp44Q8C2S0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Usp44Q8C2S0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.87■■□□□ 1.25
Usp44Q8C2S0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Usp44Q8C2S0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Usp44Q8C2S0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Usp44Q8C2S0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp44Q8C2S0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp44Q8C2S0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Usp44Q8C2S0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Usp44Q8C2S0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Usp44Q8C2S0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Usp44Q8C2S0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms