Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ptcd1Q8C2E4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ptcd1Q8C2E4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Gm13168-201ENSMUST00000121771 632 ntBASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ptcd1Q8C2E4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Ptcd1Q8C2E4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC24.01■■□□□ 1.43
Ptcd1Q8C2E4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.01■■□□□ 1.43
Ptcd1Q8C2E4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd1Q8C2E4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd1Q8C2E4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ptcd1Q8C2E4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Gm13148-201ENSMUST00000118892 745 ntBASIC24■■□□□ 1.43
Ptcd1Q8C2E4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ptcd1Q8C2E4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Ptcd1Q8C2E4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 AC158538.1-201ENSMUST00000225870 294 ntBASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Gm6365-201ENSMUST00000054711 744 ntBASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Gm43859-201ENSMUST00000200075 1412 ntBASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ptcd1Q8C2E4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ptcd1Q8C2E4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm7290-201ENSMUST00000104990 617 ntBASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm12918-201ENSMUST00000120234 636 ntBASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm15710-201ENSMUST00000121821 636 ntBASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm5075-201ENSMUST00000196916 622 ntBASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ptcd1Q8C2E4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms