Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sh3rf2Q8BZT2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf2Q8BZT2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Sh3rf2Q8BZT2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf2Q8BZT2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf2Q8BZT2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.78■□□□□ 0.76
Sh3rf2Q8BZT2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf2Q8BZT2 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.78■□□□□ 0.76
Sh3rf2Q8BZT2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf2Q8BZT2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf2Q8BZT2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sh3rf2Q8BZT2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf2Q8BZT2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf2Q8BZT2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.74■□□□□ 0.75
Sh3rf2Q8BZT2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Sh3rf2Q8BZT2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3rf2Q8BZT2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Gm10602-201ENSMUST00000098239 609 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms