Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tnfsfm13Q8BXS2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsfm13Q8BXS2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tnfsfm13Q8BXS2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsfm13Q8BXS2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Gm9847-201ENSMUST00000052528 599 ntBASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsfm13Q8BXS2 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.27■□□□□ 0.35
Tnfsfm13Q8BXS2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsfm13Q8BXS2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsfm13Q8BXS2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsfm13Q8BXS2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsfm13Q8BXS2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsfm13Q8BXS2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsfm13Q8BXS2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms