Protein–RNA interactions for Protein: Q8BX70

Vps13c, Vacuolar protein sorting-associated protein 13C, mousemouse

Predictions only

Length 3,748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13cQ8BX70 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13cQ8BX70 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13cQ8BX70 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13cQ8BX70 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps13cQ8BX70 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Trmt13-210ENSMUST00000198454 880 ntBASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps13cQ8BX70 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Gm13534-201ENSMUST00000121169 513 ntBASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Gm38205-201ENSMUST00000192243 258 ntBASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps13cQ8BX70 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Gm715-201ENSMUST00000117865 831 ntBASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Gm27275-201ENSMUST00000184318 272 ntBASIC17.55■□□□□ 0.4
Vps13cQ8BX70 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Vps13cQ8BX70 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Gm7290-201ENSMUST00000104990 617 ntBASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Gm12918-201ENSMUST00000120234 636 ntBASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Gm15710-201ENSMUST00000121821 636 ntBASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Gm5075-201ENSMUST00000196916 622 ntBASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vps13cQ8BX70 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Gm10812-201ENSMUST00000099864 546 ntBASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vps13cQ8BX70 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13cQ8BX70 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13cQ8BX70 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.52■□□□□ 0.4
Vps13cQ8BX70 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vps13cQ8BX70 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps13cQ8BX70 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vps13cQ8BX70 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps13cQ8BX70 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vps13cQ8BX70 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Gm6211-202ENSMUST00000167849 925 ntBASIC17.51■□□□□ 0.39
Vps13cQ8BX70 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vps13cQ8BX70 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms