Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm11Q8BUV6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm11Q8BUV6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm11Q8BUV6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm11Q8BUV6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm11Q8BUV6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Gm43530-201ENSMUST00000195920 274 ntBASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm11Q8BUV6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Gm40881-201ENSMUST00000223397 166 ntBASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm11Q8BUV6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm11Q8BUV6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm11Q8BUV6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm11Q8BUV6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Lsm11Q8BUV6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.22
Lsm11Q8BUV6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.46■□□□□ 0.22
Lsm11Q8BUV6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms