Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne3Q8BT60 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne3Q8BT60 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne3Q8BT60 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne3Q8BT60 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cpne3Q8BT60 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne3Q8BT60 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne3Q8BT60 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Cpne3Q8BT60 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.67■□□□□ 0.58
Cpne3Q8BT60 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cpne3Q8BT60 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpne3Q8BT60 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpne3Q8BT60 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms