Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rd3Q8BRE0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rd3Q8BRE0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Rd3Q8BRE0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rd3Q8BRE0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rd3Q8BRE0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rd3Q8BRE0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rd3Q8BRE0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rd3Q8BRE0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.63■□□□□ 0.89
Rd3Q8BRE0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Mir5133-201ENSMUST00000174955 77 ntBASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rd3Q8BRE0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rd3Q8BRE0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Gm38205-201ENSMUST00000192243 258 ntBASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rd3Q8BRE0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rd3Q8BRE0 AA386476-201ENSMUST00000098781 1665 ntBASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.58■□□□□ 0.89
Rd3Q8BRE0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms