Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VmacQ8BP01 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VmacQ8BP01 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VmacQ8BP01 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VmacQ8BP01 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.47■■□□□ 1.19
VmacQ8BP01 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
VmacQ8BP01 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.47■■□□□ 1.19
VmacQ8BP01 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.47■■□□□ 1.19
VmacQ8BP01 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
VmacQ8BP01 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VmacQ8BP01 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.46■■□□□ 1.19
VmacQ8BP01 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.46■■□□□ 1.19
VmacQ8BP01 Gm27801-201ENSMUST00000184174 223 ntBASIC22.46■■□□□ 1.19
VmacQ8BP01 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.46■■□□□ 1.19
VmacQ8BP01 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.46■■□□□ 1.19
VmacQ8BP01 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VmacQ8BP01 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VmacQ8BP01 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VmacQ8BP01 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.45■■□□□ 1.18
VmacQ8BP01 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
VmacQ8BP01 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.45■■□□□ 1.18
VmacQ8BP01 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.45■■□□□ 1.18
VmacQ8BP01 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VmacQ8BP01 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
VmacQ8BP01 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VmacQ8BP01 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
VmacQ8BP01 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.45■■□□□ 1.18
VmacQ8BP01 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
VmacQ8BP01 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
VmacQ8BP01 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
VmacQ8BP01 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.44■■□□□ 1.18
VmacQ8BP01 Gm40848-201ENSMUST00000221998 324 ntBASIC22.44■■□□□ 1.18
VmacQ8BP01 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VmacQ8BP01 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
VmacQ8BP01 Gm45640-201ENSMUST00000210665 1896 ntBASIC22.43■■□□□ 1.18
VmacQ8BP01 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.43■■□□□ 1.18
VmacQ8BP01 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
VmacQ8BP01 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
VmacQ8BP01 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VmacQ8BP01 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
VmacQ8BP01 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VmacQ8BP01 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VmacQ8BP01 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VmacQ8BP01 Gm43060-201ENSMUST00000200621 289 ntBASIC22.41■■□□□ 1.18
VmacQ8BP01 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VmacQ8BP01 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.41■■□□□ 1.18
VmacQ8BP01 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VmacQ8BP01 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VmacQ8BP01 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VmacQ8BP01 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
VmacQ8BP01 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
VmacQ8BP01 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.4■■□□□ 1.18
VmacQ8BP01 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.4■■□□□ 1.18
VmacQ8BP01 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.4■■□□□ 1.18
VmacQ8BP01 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.4■■□□□ 1.18
VmacQ8BP01 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VmacQ8BP01 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms