Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Gm22238-201ENSMUST00000175222 88 ntBASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf38Q8BI21 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf38Q8BI21 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf38Q8BI21 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf38Q8BI21 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf38Q8BI21 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 AA386476-201ENSMUST00000098781 1665 ntBASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf38Q8BI21 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf38Q8BI21 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf38Q8BI21 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf38Q8BI21 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms