Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1bQ8BH88 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Gm43017-201ENSMUST00000198296 752 ntBASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1bQ8BH88 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.1■□□□□ 0.97
Depdc1bQ8BH88 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Gm8495-201ENSMUST00000188740 694 ntBASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Depdc1bQ8BH88 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Gm18284-201ENSMUST00000172604 624 ntBASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1bQ8BH88 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Depdc1bQ8BH88 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.08■□□□□ 0.96
Depdc1bQ8BH88 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Depdc1bQ8BH88 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1bQ8BH88 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Depdc1bQ8BH88 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1bQ8BH88 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Depdc1bQ8BH88 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.03■□□□□ 0.96
Depdc1bQ8BH88 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms