Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Gm7417-201ENSMUST00000192950 473 ntBASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Smndc1Q8BGT7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smndc1Q8BGT7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smndc1Q8BGT7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.76■□□□□ 0.59
Smndc1Q8BGT7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smndc1Q8BGT7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smndc1Q8BGT7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smndc1Q8BGT7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smndc1Q8BGT7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smndc1Q8BGT7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smndc1Q8BGT7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms