Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nucks1Q80XU3 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.76■□□□□ 0.91
Nucks1Q80XU3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nucks1Q80XU3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nucks1Q80XU3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nucks1Q80XU3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nucks1Q80XU3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.72■□□□□ 0.91
Nucks1Q80XU3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nucks1Q80XU3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nucks1Q80XU3 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nucks1Q80XU3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nucks1Q80XU3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nucks1Q80XU3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nucks1Q80XU3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nucks1Q80XU3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nucks1Q80XU3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nucks1Q80XU3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nucks1Q80XU3 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.68■□□□□ 0.9
Nucks1Q80XU3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nucks1Q80XU3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nucks1Q80XU3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.68■□□□□ 0.9
Nucks1Q80XU3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nucks1Q80XU3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nucks1Q80XU3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nucks1Q80XU3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nucks1Q80XU3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nucks1Q80XU3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.67■□□□□ 0.9
Nucks1Q80XU3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nucks1Q80XU3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.66■□□□□ 0.9
Nucks1Q80XU3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Nucks1Q80XU3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Nucks1Q80XU3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms