Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf168Q80XJ2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf168Q80XJ2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf168Q80XJ2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf168Q80XJ2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Rnf168Q80XJ2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Rnf168Q80XJ2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf168Q80XJ2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf168Q80XJ2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Gm27801-201ENSMUST00000184174 223 ntBASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf168Q80XJ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.67■□□□□ 0.9
Rnf168Q80XJ2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf168Q80XJ2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf168Q80XJ2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnf168Q80XJ2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms