Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc116Q80X53 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc116Q80X53 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ccdc116Q80X53 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
Ccdc116Q80X53 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ccdc116Q80X53 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ccdc116Q80X53 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Serp2-204ENSMUST00000228055 705 ntBASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ccdc116Q80X53 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Ccdc116Q80X53 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc116Q80X53 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc116Q80X53 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ccdc116Q80X53 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.01■□□□□ 0.63
Ccdc116Q80X53 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19■□□□□ 0.63
Ccdc116Q80X53 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc116Q80X53 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Ccdc116Q80X53 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc116Q80X53 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc116Q80X53 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc116Q80X53 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc116Q80X53 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccdc116Q80X53 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Ccdc116Q80X53 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ccdc116Q80X53 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Gm12251-201ENSMUST00000117893 792 ntBASIC18.99■□□□□ 0.63
Ccdc116Q80X53 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Gm43137-201ENSMUST00000198052 594 ntBASIC18.99■□□□□ 0.63
Ccdc116Q80X53 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccdc116Q80X53 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccdc116Q80X53 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms