Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sh3tc2Q80VA5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Sh3tc2Q80VA5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Sh3tc2Q80VA5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Gm27801-201ENSMUST00000184174 223 ntBASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3tc2Q80VA5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Mir5133-201ENSMUST00000174955 77 ntBASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3tc2Q80VA5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3tc2Q80VA5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3tc2Q80VA5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3tc2Q80VA5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3tc2Q80VA5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3tc2Q80VA5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.15■□□□□ 0.98
Sh3tc2Q80VA5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3tc2Q80VA5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3tc2Q80VA5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Sh3tc2Q80VA5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3tc2Q80VA5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3tc2Q80VA5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sh3tc2Q80VA5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms