Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Avl9Q80U56 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Avl9Q80U56 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Avl9Q80U56 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.8■□□□□ 0.6
Avl9Q80U56 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Avl9Q80U56 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Avl9Q80U56 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Avl9Q80U56 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.79■□□□□ 0.6
Avl9Q80U56 Gm10849-201ENSMUST00000100397 618 ntBASIC18.79■□□□□ 0.6
Avl9Q80U56 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Avl9Q80U56 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.79■□□□□ 0.6
Avl9Q80U56 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Avl9Q80U56 Gm9988-201ENSMUST00000069786 435 ntBASIC18.79■□□□□ 0.6
Avl9Q80U56 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Avl9Q80U56 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Avl9Q80U56 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Gm27405-201ENSMUST00000184201 112 ntBASIC18.78■□□□□ 0.6
Avl9Q80U56 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.78■□□□□ 0.6
Avl9Q80U56 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 AA386476-201ENSMUST00000098781 1665 ntBASIC18.78■□□□□ 0.6
Avl9Q80U56 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Avl9Q80U56 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Avl9Q80U56 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Avl9Q80U56 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.77■□□□□ 0.6
Avl9Q80U56 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Avl9Q80U56 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Avl9Q80U56 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Avl9Q80U56 Gm10033-202ENSMUST00000211874 928 ntBASIC18.77■□□□□ 0.6
Avl9Q80U56 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Avl9Q80U56 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.77■□□□□ 0.6
Avl9Q80U56 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Avl9Q80U56 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Avl9Q80U56 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Avl9Q80U56 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Avl9Q80U56 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Avl9Q80U56 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Avl9Q80U56 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.76■□□□□ 0.59
Avl9Q80U56 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Avl9Q80U56 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.75■□□□□ 0.59
Avl9Q80U56 Gm7291-201ENSMUST00000199147 382 ntBASIC18.75■□□□□ 0.59
Avl9Q80U56 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.75■□□□□ 0.59
Avl9Q80U56 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.75■□□□□ 0.59
Avl9Q80U56 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Avl9Q80U56 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Avl9Q80U56 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Avl9Q80U56 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Avl9Q80U56 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Avl9Q80U56 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.74■□□□□ 0.59
Avl9Q80U56 AV356131-201ENSMUST00000206201 750 ntBASIC18.74■□□□□ 0.59
Avl9Q80U56 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Avl9Q80U56 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.74■□□□□ 0.59
Avl9Q80U56 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Reep4-203ENSMUST00000226563 1444 ntBASIC18.74■□□□□ 0.59
Avl9Q80U56 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Avl9Q80U56 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Avl9Q80U56 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Avl9Q80U56 Gm13234-201ENSMUST00000120010 747 ntBASIC18.73■□□□□ 0.59
Avl9Q80U56 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.73■□□□□ 0.59
Avl9Q80U56 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Avl9Q80U56 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Avl9Q80U56 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.72■□□□□ 0.59
Avl9Q80U56 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Avl9Q80U56 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Avl9Q80U56 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Avl9Q80U56 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Avl9Q80U56 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms