Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3d21Q7TSG5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Gm12251-201ENSMUST00000117893 792 ntBASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Gm45417-201ENSMUST00000209533 758 ntBASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3d21Q7TSG5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sh3d21Q7TSG5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3d21Q7TSG5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 AA386476-201ENSMUST00000098781 1665 ntBASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3d21Q7TSG5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3d21Q7TSG5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Gm8493-201ENSMUST00000196881 489 ntBASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.23■□□□□ 0.99
Sh3d21Q7TSG5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Notumos-201ENSMUST00000151998 2659 ntBASIC21.22■□□□□ 0.99
Sh3d21Q7TSG5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3d21Q7TSG5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Sh3d21Q7TSG5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3d21Q7TSG5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d21Q7TSG5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d21Q7TSG5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3d21Q7TSG5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.19■□□□□ 0.98
Sh3d21Q7TSG5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms