Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx4Q7TNK1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.61■□□□□ 0.57
Rfx4Q7TNK1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx4Q7TNK1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.59■□□□□ 0.57
Rfx4Q7TNK1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.58■□□□□ 0.57
Rfx4Q7TNK1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx4Q7TNK1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx4Q7TNK1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx4Q7TNK1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms