Protein–RNA interactions for Protein: Q7TMD7

Dsg4, Desmoglein-4, mousemouse

Predictions only

Length 1,041 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg4Q7TMD7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dsg4Q7TMD7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Dsg4Q7TMD7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Dsg4Q7TMD7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dsg4Q7TMD7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.83■□□□□ 0.6
Dsg4Q7TMD7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.82■□□□□ 0.6
Dsg4Q7TMD7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Dsg4Q7TMD7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
Dsg4Q7TMD7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dsg4Q7TMD7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Smad6-203ENSMUST00000179458 273 ntBASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dsg4Q7TMD7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Dsg4Q7TMD7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Dsg4Q7TMD7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dsg4Q7TMD7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms