Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.06■□□□□ 0.8
Cspg5Q71M36 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Cspg5Q71M36 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Reep4-203ENSMUST00000226563 1444 ntBASIC20.05■□□□□ 0.8
Cspg5Q71M36 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.05■□□□□ 0.8
Cspg5Q71M36 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cspg5Q71M36 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cspg5Q71M36 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg5Q71M36 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.02■□□□□ 0.8
Cspg5Q71M36 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg5Q71M36 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cspg5Q71M36 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cspg5Q71M36 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cspg5Q71M36 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.01■□□□□ 0.79
Cspg5Q71M36 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg5Q71M36 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cspg5Q71M36 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Gm44949-201ENSMUST00000206423 1450 ntBASIC20■□□□□ 0.79
Cspg5Q71M36 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Cspg5Q71M36 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Cspg5Q71M36 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg5Q71M36 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.99■□□□□ 0.79
Cspg5Q71M36 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms