Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.49■■□□□ 1.19
Scn10aQ6QIY3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scn10aQ6QIY3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scn10aQ6QIY3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scn10aQ6QIY3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scn10aQ6QIY3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scn10aQ6QIY3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 AA386476-201ENSMUST00000098781 1665 ntBASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Scn10aQ6QIY3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Scn10aQ6QIY3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scn10aQ6QIY3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn10aQ6QIY3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn10aQ6QIY3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn10aQ6QIY3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn10aQ6QIY3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Scn10aQ6QIY3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Scn10aQ6QIY3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Scn10aQ6QIY3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Mir6982-201ENSMUST00000184354 68 ntBASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn10aQ6QIY3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC22.42■■□□□ 1.18
Scn10aQ6QIY3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.42■■□□□ 1.18
Scn10aQ6QIY3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scn10aQ6QIY3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
Scn10aQ6QIY3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
Scn10aQ6QIY3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Scn10aQ6QIY3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.39■■□□□ 1.18
Scn10aQ6QIY3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Scn10aQ6QIY3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
Scn10aQ6QIY3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scn10aQ6QIY3 Gm7977-201ENSMUST00000193787 748 ntBASIC22.39■■□□□ 1.17
Scn10aQ6QIY3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.39■■□□□ 1.17
Scn10aQ6QIY3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scn10aQ6QIY3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scn10aQ6QIY3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Gm5643-201ENSMUST00000117081 966 ntBASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn10aQ6QIY3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scn10aQ6QIY3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Scn10aQ6QIY3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Scn10aQ6QIY3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scn10aQ6QIY3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms