Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85bQ6PDY0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc85bQ6PDY0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85bQ6PDY0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85bQ6PDY0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc85bQ6PDY0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85bQ6PDY0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc85bQ6PDY0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc85bQ6PDY0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85bQ6PDY0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85bQ6PDY0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc85bQ6PDY0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85bQ6PDY0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc85bQ6PDY0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Mir6236-201ENSMUST00000184437 123 ntBASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85bQ6PDY0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc85bQ6PDY0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ccdc85bQ6PDY0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Gm27275-201ENSMUST00000184318 272 ntBASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc85bQ6PDY0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85bQ6PDY0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Gm15565-201ENSMUST00000118890 427 ntBASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc85bQ6PDY0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc85bQ6PDY0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc85bQ6PDY0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Gm715-201ENSMUST00000117865 831 ntBASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Gm38205-201ENSMUST00000192243 258 ntBASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc85bQ6PDY0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Ccdc85bQ6PDY0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ccdc85bQ6PDY0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc85bQ6PDY0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc85bQ6PDY0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc85bQ6PDY0 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms