Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf220Q6PDX6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf220Q6PDX6 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf220Q6PDX6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf220Q6PDX6 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf220Q6PDX6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf220Q6PDX6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.33■□□□□ 0.52
Rnf220Q6PDX6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Fst-202ENSMUST00000223640 2612 ntBASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf220Q6PDX6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf220Q6PDX6 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf220Q6PDX6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf220Q6PDX6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf220Q6PDX6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf220Q6PDX6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf220Q6PDX6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf220Q6PDX6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms