Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.34■■□□□ 1.33
Best3Q6H1V1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Best3Q6H1V1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Best3Q6H1V1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Best3Q6H1V1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Best3Q6H1V1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.33■■□□□ 1.33
Best3Q6H1V1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Best3Q6H1V1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Best3Q6H1V1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Best3Q6H1V1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
Best3Q6H1V1 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.33■■□□□ 1.33
Best3Q6H1V1 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.33■■□□□ 1.32
Best3Q6H1V1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Best3Q6H1V1 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Best3Q6H1V1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.32■■□□□ 1.32
Best3Q6H1V1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.32■■□□□ 1.32
Best3Q6H1V1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC23.32■■□□□ 1.32
Best3Q6H1V1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Best3Q6H1V1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.31■■□□□ 1.32
Best3Q6H1V1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Best3Q6H1V1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Best3Q6H1V1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Best3Q6H1V1 Gm7860-201ENSMUST00000121190 879 ntBASIC23.3■■□□□ 1.32
Best3Q6H1V1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Best3Q6H1V1 Gm26524-201ENSMUST00000192339 390 ntBASIC23.3■■□□□ 1.32
Best3Q6H1V1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Best3Q6H1V1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Best3Q6H1V1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Best3Q6H1V1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Best3Q6H1V1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Best3Q6H1V1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
Best3Q6H1V1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.29■■□□□ 1.32
Best3Q6H1V1 Gm37856-201ENSMUST00000191634 999 ntBASIC23.29■■□□□ 1.32
Best3Q6H1V1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.29■■□□□ 1.32
Best3Q6H1V1 Gm10252-201ENSMUST00000209541 832 ntBASIC23.29■■□□□ 1.32
Best3Q6H1V1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Best3Q6H1V1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.28■■□□□ 1.32
Best3Q6H1V1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Gm13168-201ENSMUST00000121771 632 ntBASIC23.27■■□□□ 1.32
Best3Q6H1V1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.27■■□□□ 1.32
Best3Q6H1V1 AC135637.1-201ENSMUST00000227750 365 ntBASIC23.27■■□□□ 1.32
Best3Q6H1V1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Best3Q6H1V1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Best3Q6H1V1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.26■■□□□ 1.31
Best3Q6H1V1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Best3Q6H1V1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Best3Q6H1V1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Best3Q6H1V1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Best3Q6H1V1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Best3Q6H1V1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Best3Q6H1V1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.25■■□□□ 1.31
Best3Q6H1V1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.24■■□□□ 1.31
Best3Q6H1V1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Best3Q6H1V1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms