Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhga7Q6DD96 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga7Q6DD96 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga7Q6DD96 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga7Q6DD96 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga7Q6DD96 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 AA386476-201ENSMUST00000098781 1665 ntBASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Rarb-207ENSMUST00000225921 2756 ntBASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga7Q6DD96 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhga7Q6DD96 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.59
Pcdhga7Q6DD96 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhga7Q6DD96 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhga7Q6DD96 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga7Q6DD96 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga7Q6DD96 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga7Q6DD96 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga7Q6DD96 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhga7Q6DD96 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms