Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.81■□□□□ 0.28
Lcn3Q62471 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lcn3Q62471 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lcn3Q62471 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Lcn3Q62471 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.8■□□□□ 0.28
Lcn3Q62471 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.8■□□□□ 0.28
Lcn3Q62471 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Lcn3Q62471 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lcn3Q62471 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lcn3Q62471 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lcn3Q62471 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lcn3Q62471 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.78■□□□□ 0.28
Lcn3Q62471 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Lcn3Q62471 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lcn3Q62471 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lcn3Q62471 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lcn3Q62471 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lcn3Q62471 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lcn3Q62471 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lcn3Q62471 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.77■□□□□ 0.28
Lcn3Q62471 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lcn3Q62471 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.77■□□□□ 0.28
Lcn3Q62471 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lcn3Q62471 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lcn3Q62471 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Lcn3Q62471 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lcn3Q62471 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lcn3Q62471 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lcn3Q62471 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.76■□□□□ 0.27
Lcn3Q62471 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.76■□□□□ 0.27
Lcn3Q62471 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lcn3Q62471 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lcn3Q62471 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.75■□□□□ 0.27
Lcn3Q62471 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Lcn3Q62471 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.75■□□□□ 0.27
Lcn3Q62471 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.75■□□□□ 0.27
Lcn3Q62471 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lcn3Q62471 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lcn3Q62471 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lcn3Q62471 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms