Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Vsx2Q61412 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.91■□□□□ 0.62
Vsx2Q61412 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.91■□□□□ 0.62
Vsx2Q61412 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Vsx2Q61412 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Vsx2Q61412 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.9■□□□□ 0.62
Vsx2Q61412 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx2Q61412 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.9■□□□□ 0.62
Vsx2Q61412 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.9■□□□□ 0.62
Vsx2Q61412 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx2Q61412 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.9■□□□□ 0.62
Vsx2Q61412 Spcs1-204ENSMUST00000226782 949 ntBASIC18.9■□□□□ 0.62
Vsx2Q61412 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.9■□□□□ 0.62
Vsx2Q61412 Serp2-204ENSMUST00000228055 705 ntBASIC18.9■□□□□ 0.62
Vsx2Q61412 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx2Q61412 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx2Q61412 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Vsx2Q61412 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Vsx2Q61412 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.9■□□□□ 0.62
Vsx2Q61412 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx2Q61412 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.89■□□□□ 0.61
Vsx2Q61412 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx2Q61412 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vsx2Q61412 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.88■□□□□ 0.61
Vsx2Q61412 Gm43017-201ENSMUST00000198296 752 ntBASIC18.88■□□□□ 0.61
Vsx2Q61412 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.88■□□□□ 0.61
Vsx2Q61412 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vsx2Q61412 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vsx2Q61412 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.87■□□□□ 0.61
Vsx2Q61412 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vsx2Q61412 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vsx2Q61412 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vsx2Q61412 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx2Q61412 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.86■□□□□ 0.61
Vsx2Q61412 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx2Q61412 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.86■□□□□ 0.61
Vsx2Q61412 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx2Q61412 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx2Q61412 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vsx2Q61412 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Vsx2Q61412 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vsx2Q61412 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vsx2Q61412 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Vsx2Q61412 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.85■□□□□ 0.61
Vsx2Q61412 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vsx2Q61412 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vsx2Q61412 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vsx2Q61412 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.84■□□□□ 0.61
Vsx2Q61412 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.84■□□□□ 0.61
Vsx2Q61412 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vsx2Q61412 Gm43173-201ENSMUST00000202246 593 ntBASIC18.84■□□□□ 0.61
Vsx2Q61412 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.84■□□□□ 0.61
Vsx2Q61412 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.84■□□□□ 0.61
Vsx2Q61412 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.84■□□□□ 0.61
Vsx2Q61412 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vsx2Q61412 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.83■□□□□ 0.61
Vsx2Q61412 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.83■□□□□ 0.61
Vsx2Q61412 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vsx2Q61412 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx2Q61412 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.83■□□□□ 0.6
Vsx2Q61412 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx2Q61412 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.83■□□□□ 0.6
Vsx2Q61412 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vsx2Q61412 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms