Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Six4Q61321 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six4Q61321 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six4Q61321 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Six4Q61321 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Six4Q61321 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Six4Q61321 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six4Q61321 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six4Q61321 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Six4Q61321 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.71■□□□□ 0.75
Six4Q61321 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Six4Q61321 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.7■□□□□ 0.74
Six4Q61321 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Six4Q61321 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Six4Q61321 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six4Q61321 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six4Q61321 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.69■□□□□ 0.74
Six4Q61321 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six4Q61321 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.69■□□□□ 0.74
Six4Q61321 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.69■□□□□ 0.74
Six4Q61321 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Six4Q61321 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Six4Q61321 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six4Q61321 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.67■□□□□ 0.74
Six4Q61321 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.67■□□□□ 0.74
Six4Q61321 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six4Q61321 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Six4Q61321 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.66■□□□□ 0.74
Six4Q61321 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Six4Q61321 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Six4Q61321 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Six4Q61321 Gm43060-201ENSMUST00000200621 289 ntBASIC19.66■□□□□ 0.74
Six4Q61321 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.66■□□□□ 0.74
Six4Q61321 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.66■□□□□ 0.74
Six4Q61321 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six4Q61321 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Six4Q61321 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.65■□□□□ 0.74
Six4Q61321 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Six4Q61321 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.65■□□□□ 0.74
Six4Q61321 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Six4Q61321 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six4Q61321 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Six4Q61321 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.64■□□□□ 0.73
Six4Q61321 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.64■□□□□ 0.73
Six4Q61321 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.64■□□□□ 0.73
Six4Q61321 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six4Q61321 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms