Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch1Q61115 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC28.6■■■□□ 2.17
Ptch1Q61115 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch1Q61115 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch1Q61115 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ptch1Q61115 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ptch1Q61115 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC28.59■■■□□ 2.17
Ptch1Q61115 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Ptch1Q61115 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ptch1Q61115 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ptch1Q61115 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ptch1Q61115 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ptch1Q61115 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ptch1Q61115 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ptch1Q61115 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC28.58■■■□□ 2.17
Ptch1Q61115 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ptch1Q61115 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Ptch1Q61115 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptch1Q61115 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptch1Q61115 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
Ptch1Q61115 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Ptch1Q61115 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ptch1Q61115 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Ptch1Q61115 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ptch1Q61115 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ptch1Q61115 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC28.56■■■□□ 2.16
Ptch1Q61115 Gm9484-201ENSMUST00000195892 1159 ntBASIC28.55■■■□□ 2.16
Ptch1Q61115 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptch1Q61115 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptch1Q61115 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ptch1Q61115 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ptch1Q61115 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Ptch1Q61115 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ptch1Q61115 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC28.54■■■□□ 2.16
Ptch1Q61115 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Gm13509-201ENSMUST00000119733 1308 ntBASIC28.54■■■□□ 2.16
Ptch1Q61115 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Ptch1Q61115 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC28.54■■■□□ 2.16
Ptch1Q61115 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ptch1Q61115 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Ptch1Q61115 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
Ptch1Q61115 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC28.53■■■□□ 2.16
Ptch1Q61115 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ptch1Q61115 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ptch1Q61115 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Ptch1Q61115 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC28.53■■■□□ 2.16
Ptch1Q61115 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Ptch1Q61115 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ptch1Q61115 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC28.52■■■□□ 2.16
Ptch1Q61115 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ptch1Q61115 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ptch1Q61115 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ptch1Q61115 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ptch1Q61115 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Ptch1Q61115 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Ptch1Q61115 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC28.52■■■□□ 2.16
Ptch1Q61115 Gm10698-201ENSMUST00000182663 604 ntBASIC28.52■■■□□ 2.16
Ptch1Q61115 AC154266.1-201ENSMUST00000223190 503 ntBASIC28.52■■■□□ 2.16
Ptch1Q61115 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ptch1Q61115 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ptch1Q61115 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC28.51■■■□□ 2.15
Ptch1Q61115 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC28.51■■■□□ 2.15
Ptch1Q61115 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.15
Ptch1Q61115 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Ptch1Q61115 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC28.51■■■□□ 2.15
Ptch1Q61115 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Ptch1Q61115 Dio3-201ENSMUST00000097228 1449 ntBASIC28.5■■■□□ 2.15
Ptch1Q61115 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptch1Q61115 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptch1Q61115 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC28.5■■■□□ 2.15
Ptch1Q61115 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Ptch1Q61115 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Ptch1Q61115 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptch1Q61115 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
Ptch1Q61115 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptch1Q61115 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptch1Q61115 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ptch1Q61115 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC28.48■■■□□ 2.15
Ptch1Q61115 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ptch1Q61115 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ptch1Q61115 Gm7860-201ENSMUST00000121190 879 ntBASIC28.48■■■□□ 2.15
Ptch1Q61115 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC28.48■■■□□ 2.15
Ptch1Q61115 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC28.48■■■□□ 2.15
Ptch1Q61115 AC153881.1-201ENSMUST00000214448 284 ntBASIC28.48■■■□□ 2.15
Ptch1Q61115 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC28.48■■■□□ 2.15
Ptch1Q61115 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ptch1Q61115 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ptch1Q61115 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ptch1Q61115 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC28.47■■■□□ 2.15
Ptch1Q61115 Gm37055-201ENSMUST00000191866 133 ntBASIC28.47■■■□□ 2.15
Ptch1Q61115 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Ptch1Q61115 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ptch1Q61115 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms