Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Serp2-204ENSMUST00000228055 705 ntBASIC19.84■□□□□ 0.77
Foxd4Q60688 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.84■□□□□ 0.77
Foxd4Q60688 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxd4Q60688 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxd4Q60688 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.84■□□□□ 0.77
Foxd4Q60688 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxd4Q60688 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Foxd4Q60688 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.83■□□□□ 0.77
Foxd4Q60688 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.83■□□□□ 0.77
Foxd4Q60688 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Foxd4Q60688 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Foxd4Q60688 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Foxd4Q60688 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Foxd4Q60688 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Foxd4Q60688 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Foxd4Q60688 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Foxd4Q60688 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.82■□□□□ 0.76
Foxd4Q60688 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Foxd4Q60688 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Foxd4Q60688 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.82■□□□□ 0.76
Foxd4Q60688 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Foxd4Q60688 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.82■□□□□ 0.76
Foxd4Q60688 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.82■□□□□ 0.76
Foxd4Q60688 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Foxd4Q60688 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Foxd4Q60688 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd4Q60688 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd4Q60688 Gm12922-201ENSMUST00000120626 809 ntBASIC19.81■□□□□ 0.76
Foxd4Q60688 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.81■□□□□ 0.76
Foxd4Q60688 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.81■□□□□ 0.76
Foxd4Q60688 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.81■□□□□ 0.76
Foxd4Q60688 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd4Q60688 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.81■□□□□ 0.76
Foxd4Q60688 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Foxd4Q60688 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.8■□□□□ 0.76
Foxd4Q60688 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.8■□□□□ 0.76
Foxd4Q60688 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Foxd4Q60688 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd4Q60688 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.79■□□□□ 0.76
Foxd4Q60688 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.79■□□□□ 0.76
Foxd4Q60688 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd4Q60688 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Foxd4Q60688 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.78■□□□□ 0.76
Foxd4Q60688 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Foxd4Q60688 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Foxd4Q60688 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd4Q60688 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.77■□□□□ 0.76
Foxd4Q60688 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd4Q60688 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd4Q60688 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Foxd4Q60688 Gm43530-201ENSMUST00000195920 274 ntBASIC19.77■□□□□ 0.76
Foxd4Q60688 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd4Q60688 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Foxd4Q60688 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd4Q60688 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd4Q60688 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd4Q60688 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Foxd4Q60688 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd4Q60688 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd4Q60688 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Foxd4Q60688 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Foxd4Q60688 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd4Q60688 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Foxd4Q60688 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.76■□□□□ 0.75
Foxd4Q60688 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.76■□□□□ 0.75
Foxd4Q60688 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.76■□□□□ 0.75
Foxd4Q60688 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd4Q60688 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms