Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atp13a4Q5XF90 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp13a4Q5XF90 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp13a4Q5XF90 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp13a4Q5XF90 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp13a4Q5XF90 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp13a4Q5XF90 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Smad6-203ENSMUST00000179458 273 ntBASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp13a4Q5XF90 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp13a4Q5XF90 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Gm43017-201ENSMUST00000198296 752 ntBASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Atp13a4Q5XF90 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp13a4Q5XF90 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp13a4Q5XF90 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Atp13a4Q5XF90 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atp13a4Q5XF90 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Atp13a4Q5XF90 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atp13a4Q5XF90 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp13a4Q5XF90 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp13a4Q5XF90 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Atp13a4Q5XF90 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp13a4Q5XF90 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atp13a4Q5XF90 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atp13a4Q5XF90 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atp13a4Q5XF90 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atp13a4Q5XF90 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Atp13a4Q5XF90 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atp13a4Q5XF90 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atp13a4Q5XF90 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atp13a4Q5XF90 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21■□□□□ 0.95
Atp13a4Q5XF90 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21■□□□□ 0.95
Atp13a4Q5XF90 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Atp13a4Q5XF90 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atp13a4Q5XF90 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Atp13a4Q5XF90 Gm10571-201ENSMUST00000097869 1638 ntBASIC21■□□□□ 0.95
Atp13a4Q5XF90 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atp13a4Q5XF90 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atp13a4Q5XF90 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms