Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm4419-202ENSMUST00000226239 1431 ntBASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav3-1Q5R1I8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav3-1Q5R1I8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav3-1Q5R1I8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav3-1Q5R1I8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav3-1Q5R1I8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3-1Q5R1I8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3-1Q5R1I8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-1Q5R1I8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-1Q5R1I8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms